Protein–RNA interactions for Protein: Q2NKI2

Vax1, Ventral anterior homeobox 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vax1Q2NKI2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vax1Q2NKI2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gm4930-201ENSMUST00000219926 1087 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 CT030652.1-201ENSMUST00000227377 1235 ntBASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vax1Q2NKI2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm11500-201ENSMUST00000118237 601 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm11244-201ENSMUST00000121243 237 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm12906-201ENSMUST00000154610 441 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Mir6973a-201ENSMUST00000183646 78 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm37782-201ENSMUST00000194879 678 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm42430-201ENSMUST00000197209 616 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm44882-201ENSMUST00000205702 802 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Gm45085-201ENSMUST00000209100 441 ntBASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vax1Q2NKI2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms