Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1sQ02789 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm15793-201ENSMUST00000121857 495 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm26379-201ENSMUST00000178125 138 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm8707-201ENSMUST00000183325 980 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm3945-201ENSMUST00000196637 683 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm12377-201ENSMUST00000118656 252 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm13758-201ENSMUST00000118699 743 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm16210-201ENSMUST00000122161 610 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.16□□□□□ -0.14
Cacna1sQ02789 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1sQ02789 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Gm18042-201ENSMUST00000219887 790 ntBASIC14.15□□□□□ -0.14
Cacna1sQ02789 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1sQ02789 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.15□□□□□ -0.15
Cacna1sQ02789 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cacna1sQ02789 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Mir705-201ENSMUST00000102058 82 ntBASIC14.14□□□□□ -0.15
Cacna1sQ02789 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Gm11235-201ENSMUST00000117763 333 ntBASIC14.14□□□□□ -0.15
Cacna1sQ02789 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Gm10254-201ENSMUST00000052888 867 ntBASIC14.14□□□□□ -0.15
Cacna1sQ02789 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 CT571271.1-201ENSMUST00000227071 670 ntBASIC14.14□□□□□ -0.15
Cacna1sQ02789 Gm10617-201ENSMUST00000098368 1172 ntBASIC14.14□□□□□ -0.15
Cacna1sQ02789 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cacna1sQ02789 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cacna1sQ02789 AC158777.1-201ENSMUST00000226216 1724 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 230.7 ms