Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Gm12463-201ENSMUST00000118271 849 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Gm43962-201ENSMUST00000203898 190 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Olfr284-202ENSMUST00000206647 966 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Gm45598-202ENSMUST00000210719 986 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Gm2553-201ENSMUST00000215986 605 ntBASIC9.77□□□□□ -0.85
Smn1P97801 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.77□□□□□ -0.85
Smn1P97801 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smn1P97801 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smn1P97801 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Smn1P97801 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.77□□□□□ -0.85
Smn1P97801 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.77□□□□□ -0.85
Smn1P97801 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Smn1P97801 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Smn1P97801 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.76□□□□□ -0.85
Smn1P97801 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.76□□□□□ -0.85
Smn1P97801 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.76□□□□□ -0.85
Smn1P97801 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.76□□□□□ -0.85
Smn1P97801 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Smn1P97801 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.76□□□□□ -0.85
Smn1P97801 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.76□□□□□ -0.85
Smn1P97801 Gm5982-201ENSMUST00000196234 512 ntBASIC9.76□□□□□ -0.85
Smn1P97801 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Gm6450-201ENSMUST00000200896 574 ntBASIC9.76□□□□□ -0.85
Smn1P97801 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.76□□□□□ -0.85
Smn1P97801 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 AC153961.1-201ENSMUST00000217760 385 ntBASIC9.76□□□□□ -0.85
Smn1P97801 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.76□□□□□ -0.85
Smn1P97801 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Smn1P97801 Gm5705-201ENSMUST00000066241 711 ntBASIC9.76□□□□□ -0.85
Smn1P97801 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Smn1P97801 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
Smn1P97801 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms