Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx3-2P97503 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gm23771-201ENSMUST00000178702 110 ntBASIC10.87□□□□□ -0.67
Nkx3-2P97503 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Mir7076-201ENSMUST00000183519 74 ntBASIC10.87□□□□□ -0.67
Nkx3-2P97503 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gm44980-201ENSMUST00000205826 314 ntBASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.87□□□□□ -0.67
Nkx3-2P97503 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.87□□□□□ -0.67
Nkx3-2P97503 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.87□□□□□ -0.67
Nkx3-2P97503 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx3-2P97503 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm13888-201ENSMUST00000119148 422 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm11836-201ENSMUST00000121022 441 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm8459-201ENSMUST00000162504 760 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm37299-201ENSMUST00000193951 826 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm2517-201ENSMUST00000215651 348 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.86□□□□□ -0.67
Nkx3-2P97503 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nkx3-2P97503 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms