Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lig3P97386 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Gm6485-201ENSMUST00000160676 439 ntBASIC12.59□□□□□ -0.39
Lig3P97386 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.59□□□□□ -0.39
Lig3P97386 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.59□□□□□ -0.39
Lig3P97386 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.59□□□□□ -0.39
Lig3P97386 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.59□□□□□ -0.39
Lig3P97386 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.59□□□□□ -0.39
Lig3P97386 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Lig3P97386 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Lig3P97386 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lig3P97386 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lig3P97386 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Lig3P97386 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lig3P97386 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lig3P97386 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.58□□□□□ -0.4
Lig3P97386 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Gm24934-201ENSMUST00000103764 111 ntBASIC12.58□□□□□ -0.4
Lig3P97386 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lig3P97386 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.58□□□□□ -0.4
Lig3P97386 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lig3P97386 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.58□□□□□ -0.4
Lig3P97386 Gm8343-201ENSMUST00000182705 994 ntBASIC12.58□□□□□ -0.4
Lig3P97386 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.58□□□□□ -0.4
Lig3P97386 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lig3P97386 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.58□□□□□ -0.4
Lig3P97386 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.58□□□□□ -0.4
Lig3P97386 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.58□□□□□ -0.4
Lig3P97386 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Mir483-201ENSMUST00000093631 73 ntBASIC12.58□□□□□ -0.4
Lig3P97386 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.58□□□□□ -0.4
Lig3P97386 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Lig3P97386 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Lig3P97386 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lig3P97386 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lig3P97386 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.57□□□□□ -0.4
Lig3P97386 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Lig3P97386 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.57□□□□□ -0.4
Lig3P97386 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Gm14219-201ENSMUST00000120414 288 ntBASIC12.57□□□□□ -0.4
Lig3P97386 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.57□□□□□ -0.4
Lig3P97386 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.57□□□□□ -0.4
Lig3P97386 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.57□□□□□ -0.4
Lig3P97386 Gm35960-201ENSMUST00000202712 767 ntBASIC12.57□□□□□ -0.4
Lig3P97386 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lig3P97386 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.57□□□□□ -0.4
Lig3P97386 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Gm25201-201ENSMUST00000083093 170 ntBASIC12.57□□□□□ -0.4
Lig3P97386 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lig3P97386 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lig3P97386 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.57□□□□□ -0.4
Lig3P97386 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.57□□□□□ -0.4
Lig3P97386 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.57□□□□□ -0.4
Lig3P97386 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
Lig3P97386 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms