Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43cP86449 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43cP86449 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim43cP86449 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Trim43cP86449 Gm9062-201ENSMUST00000117712 727 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Gm15617-201ENSMUST00000118973 771 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trim43cP86449 Gm20426-201ENSMUST00000173657 440 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim43cP86449 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim43cP86449 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Gm5996-201ENSMUST00000211110 718 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Gm45856-201ENSMUST00000212752 416 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43cP86449 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Cog3-203ENSMUST00000227473 4197 ntBASIC12.44□□□□□ -0.42
Trim43cP86449 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43cP86449 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Trim43cP86449 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Trim43cP86449 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Trim43cP86449 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim43cP86449 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43cP86449 Gm25492-201ENSMUST00000157383 129 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43cP86449 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Gm37458-201ENSMUST00000194055 410 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim43cP86449 Gm8342-201ENSMUST00000209839 757 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim43cP86449 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43cP86449 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim43cP86449 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.43□□□□□ -0.42
Trim43cP86449 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trim43cP86449 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trim43cP86449 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim43cP86449 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43cP86449 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms