Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Gm11960-201ENSMUST00000122068 925 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smad1P70340 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smad1P70340 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.8□□□□□ -0.52
Smad1P70340 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Gm9192-201ENSMUST00000183221 985 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Gm27530-201ENSMUST00000184096 98 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Mir6958-201ENSMUST00000184207 73 ntBASIC11.8□□□□□ -0.52
Smad1P70340 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Smad1P70340 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Gm8956-201ENSMUST00000203939 825 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Smad1P70340 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Smad1P70340 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Smad1P70340 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.8□□□□□ -0.52
Smad1P70340 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.8□□□□□ -0.52
Smad1P70340 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Gm1821-202ENSMUST00000227415 750 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.8□□□□□ -0.52
Smad1P70340 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.8□□□□□ -0.52
Smad1P70340 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smad1P70340 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Smad1P70340 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.79□□□□□ -0.52
Smad1P70340 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Smad1P70340 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.79□□□□□ -0.52
Smad1P70340 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smad1P70340 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Gm12501-201ENSMUST00000119163 529 ntBASIC11.79□□□□□ -0.52
Smad1P70340 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.79□□□□□ -0.52
Smad1P70340 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.79□□□□□ -0.52
Smad1P70340 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Smad1P70340 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.79□□□□□ -0.52
Smad1P70340 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.79□□□□□ -0.52
Smad1P70340 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smad1P70340 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Smad1P70340 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Smad1P70340 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smad1P70340 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.78□□□□□ -0.52
Smad1P70340 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Smad1P70340 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smad1P70340 Gm22133-201ENSMUST00000102082 109 ntBASIC11.78□□□□□ -0.52
Smad1P70340 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Smad1P70340 Gm7851-201ENSMUST00000117574 323 ntBASIC11.78□□□□□ -0.52
Smad1P70340 Gm15004-201ENSMUST00000119192 630 ntBASIC11.78□□□□□ -0.52
Smad1P70340 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.78□□□□□ -0.52
Smad1P70340 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.78□□□□□ -0.52
Smad1P70340 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.78□□□□□ -0.52
Smad1P70340 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smad1P70340 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smad1P70340 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Mir7677-201ENSMUST00000184226 67 ntBASIC11.78□□□□□ -0.52
Smad1P70340 Gm4482-201ENSMUST00000200876 742 ntBASIC11.78□□□□□ -0.52
Smad1P70340 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 Gm19287-201ENSMUST00000203190 358 ntBASIC11.78□□□□□ -0.52
Smad1P70340 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.78□□□□□ -0.52
Smad1P70340 Gm270-201ENSMUST00000223010 976 ntBASIC11.78□□□□□ -0.52
Smad1P70340 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.78□□□□□ -0.52
Smad1P70340 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smad1P70340 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms