Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Gm6754-201ENSMUST00000117124 913 ntBASIC11.73□□□□□ -0.53
Ybx1P62960 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Ybx1P62960 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ybx1P62960 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ybx1P62960 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Gm43671-201ENSMUST00000200422 433 ntBASIC11.73□□□□□ -0.53
Ybx1P62960 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.73□□□□□ -0.53
Ybx1P62960 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Ybx1P62960 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.73□□□□□ -0.53
Ybx1P62960 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Gm45500-201ENSMUST00000211676 803 ntBASIC11.73□□□□□ -0.53
Ybx1P62960 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.73□□□□□ -0.53
Ybx1P62960 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.73□□□□□ -0.53
Ybx1P62960 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.73□□□□□ -0.53
Ybx1P62960 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.73□□□□□ -0.53
Ybx1P62960 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ybx1P62960 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm25148-201ENSMUST00000104611 123 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.72□□□□□ -0.53
Ybx1P62960 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm15528-201ENSMUST00000117821 864 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm21778-201ENSMUST00000178779 471 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Gm28833-201ENSMUST00000189671 559 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.72□□□□□ -0.53
Ybx1P62960 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ybx1P62960 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.72□□□□□ -0.53
Ybx1P62960 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ybx1P62960 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.71□□□□□ -0.53
Ybx1P62960 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ybx1P62960 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ybx1P62960 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ybx1P62960 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms