Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm19144-201ENSMUST00000221921 1859 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
Rps28P62858 4930433I11Rik-201ENSMUST00000171664 2424 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Sms-201ENSMUST00000112529 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Adgrl3-213ENSMUST00000120292 5026 ntTSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Gm4880-201ENSMUST00000207645 1696 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Gm34424-202ENSMUST00000214104 1652 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Rorb-203ENSMUST00000112832 9293 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm16299-201ENSMUST00000162724 2766 ntTSL 3 BASIC6.49□□□□□ -1.37
Rps28P62858 Cdc7-202ENSMUST00000076467 2785 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Baiap3-204ENSMUST00000182435 3758 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm43034-201ENSMUST00000198678 1364 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC6.49□□□□□ -1.37
Rps28P62858 Gm13158-201ENSMUST00000122007 736 ntBASIC6.49□□□□□ -1.37
Rps28P62858 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC6.49□□□□□ -1.37
Rps28P62858 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC6.49□□□□□ -1.37
Rps28P62858 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Rps28P62858 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Mir8113-201ENSMUST00000184956 129 ntBASIC6.49□□□□□ -1.37
Rps28P62858 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Gm37714-201ENSMUST00000194742 342 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Gm18916-201ENSMUST00000198264 1246 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm31941-201ENSMUST00000209689 350 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Rps28P62858 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm37567-201ENSMUST00000193241 2279 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Gm37924-201ENSMUST00000195470 3647 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC6.49□□□□□ -1.37
Rps28P62858 Exosc1-201ENSMUST00000075280 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Btnl6-201ENSMUST00000075483 1620 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Atxn1-202ENSMUST00000167708 3751 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Prim1-205ENSMUST00000178041 1536 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Gm42822-201ENSMUST00000200507 1529 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Slc25a30-201ENSMUST00000022580 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Nod2-201ENSMUST00000054324 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 AC116596.1-201ENSMUST00000228112 1762 ntBASIC6.49□□□□□ -1.37
Rps28P62858 Wdr95-201ENSMUST00000110502 2482 ntTSL 5 BASIC6.49□□□□□ -1.37
Rps28P62858 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Rps28P62858 Lif-201ENSMUST00000040750 3798 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Rps28P62858 Mcm5-203ENSMUST00000212426 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 CT009518.1-201ENSMUST00000224886 1571 ntBASIC6.48□□□□□ -1.37
Rps28P62858 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Olfr411-203ENSMUST00000214769 2545 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rps28P62858 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Rps28P62858 Cpne5-201ENSMUST00000024805 4344 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Rps28P62858 Trim43a-201ENSMUST00000164661 1981 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms