Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Mir1905-201ENSMUST00000122779 82 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.23□□□□□ -0.93
Lmo4P61969 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.23□□□□□ -0.93
Lmo4P61969 Gm22146-201ENSMUST00000157397 288 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Gm25343-201ENSMUST00000157460 107 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Lmo4P61969 Gm6423-201ENSMUST00000204315 934 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.23□□□□□ -0.93
Lmo4P61969 Gm7525-201ENSMUST00000219425 454 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Id2-203ENSMUST00000222667 958 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Lmo4P61969 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Lmo4P61969 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Lmo4P61969 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.23□□□□□ -0.93
Lmo4P61969 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Lmo4P61969 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.23□□□□□ -0.93
Lmo4P61969 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Lmo4P61969 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Lmo4P61969 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Lmo4P61969 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC9.22□□□□□ -0.93
Lmo4P61969 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Ighv2-1-201ENSMUST00000170946 353 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Gm25951-201ENSMUST00000175330 64 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Lmo4P61969 Gm42867-201ENSMUST00000202995 469 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Gm43912-201ENSMUST00000204352 538 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Gm18463-201ENSMUST00000207258 474 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Gm18460-201ENSMUST00000208088 464 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Gm9111-201ENSMUST00000219394 709 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Lmo4P61969 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Lmo4P61969 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Lmo4P61969 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Lmo4P61969 Matn2-203ENSMUST00000226766 3252 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.22□□□□□ -0.93
Lmo4P61969 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Lmo4P61969 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Lmo4P61969 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.22□□□□□ -0.93
Lmo4P61969 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.22□□□□□ -0.93
Lmo4P61969 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Lmo4P61969 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Lmo4P61969 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Lmo4P61969 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Lmo4P61969 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.21□□□□□ -0.93
Lmo4P61969 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 834.4 ms