Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps33bP59016 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps33bP59016 Gm38007-201ENSMUST00000192187 313 ntBASIC14.34□□□□□ -0.11
Vps33bP59016 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps33bP59016 Gm9353-201ENSMUST00000200472 604 ntBASIC14.34□□□□□ -0.11
Vps33bP59016 AC118639.1-202ENSMUST00000226957 653 ntBASIC14.34□□□□□ -0.11
Vps33bP59016 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps33bP59016 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps33bP59016 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps33bP59016 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vps33bP59016 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps33bP59016 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Vps33bP59016 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.34□□□□□ -0.11
Vps33bP59016 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps33bP59016 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vps33bP59016 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vps33bP59016 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vps33bP59016 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vps33bP59016 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vps33bP59016 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC14.33□□□□□ -0.12
Vps33bP59016 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC14.33□□□□□ -0.12
Vps33bP59016 Gm12345-201ENSMUST00000119288 898 ntBASIC14.33□□□□□ -0.12
Vps33bP59016 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Gm26875-201ENSMUST00000181006 950 ntBASIC14.33□□□□□ -0.12
Vps33bP59016 Gm27444-201ENSMUST00000184157 137 ntBASIC14.33□□□□□ -0.12
Vps33bP59016 Mir8111-201ENSMUST00000184463 137 ntBASIC14.33□□□□□ -0.12
Vps33bP59016 Gm33080-201ENSMUST00000205429 172 ntBASIC14.33□□□□□ -0.12
Vps33bP59016 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps33bP59016 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC14.33□□□□□ -0.12
Vps33bP59016 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vps33bP59016 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Vps33bP59016 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps33bP59016 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps33bP59016 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps33bP59016 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vps33bP59016 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC14.33□□□□□ -0.12
Vps33bP59016 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Vps33bP59016 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vps33bP59016 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps33bP59016 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Gm8873-201ENSMUST00000217847 1439 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps33bP59016 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Vps33bP59016 Snord17-201ENSMUST00000104526 238 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.32□□□□□ -0.12
Vps33bP59016 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps33bP59016 Gm37858-201ENSMUST00000192759 1231 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 Gm42859-201ENSMUST00000199572 193 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 Gm44420-201ENSMUST00000203669 490 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps33bP59016 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.32□□□□□ -0.12
Vps33bP59016 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps33bP59016 AC101205.2-201ENSMUST00000226206 715 ntBASIC14.32□□□□□ -0.12
Vps33bP59016 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps33bP59016 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Vps33bP59016 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps33bP59016 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vps33bP59016 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Vps33bP59016 Gm37160-201ENSMUST00000193081 1689 ntBASIC14.31□□□□□ -0.12
Vps33bP59016 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps33bP59016 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms