Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.04□□□□□ -0.48
NcanP55066 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.04□□□□□ -0.48
NcanP55066 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.04□□□□□ -0.48
NcanP55066 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NcanP55066 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
NcanP55066 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.04□□□□□ -0.48
NcanP55066 Gm11380-201ENSMUST00000118067 560 ntBASIC12.04□□□□□ -0.48
NcanP55066 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
NcanP55066 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gm24140-201ENSMUST00000122773 326 ntBASIC12.04□□□□□ -0.48
NcanP55066 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.04□□□□□ -0.48
NcanP55066 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.04□□□□□ -0.48
NcanP55066 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.04□□□□□ -0.48
NcanP55066 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC12.04□□□□□ -0.48
NcanP55066 Gm6291-201ENSMUST00000179994 309 ntBASIC12.04□□□□□ -0.48
NcanP55066 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gm7445-201ENSMUST00000192115 340 ntBASIC12.04□□□□□ -0.48
NcanP55066 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.04□□□□□ -0.48
NcanP55066 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.04□□□□□ -0.48
NcanP55066 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.04□□□□□ -0.48
NcanP55066 Gm6859-201ENSMUST00000218614 989 ntBASIC12.04□□□□□ -0.48
NcanP55066 Gm29689-201ENSMUST00000221076 589 ntBASIC12.04□□□□□ -0.48
NcanP55066 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC12.04□□□□□ -0.48
NcanP55066 AC107711.3-201ENSMUST00000228939 1035 ntBASIC12.04□□□□□ -0.48
NcanP55066 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.04□□□□□ -0.48
NcanP55066 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
NcanP55066 Gm5278-201ENSMUST00000055957 552 ntBASIC12.04□□□□□ -0.48
NcanP55066 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 AU015228-201ENSMUST00000121103 1320 ntBASIC12.04□□□□□ -0.48
NcanP55066 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NcanP55066 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.03□□□□□ -0.48
NcanP55066 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NcanP55066 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
NcanP55066 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
NcanP55066 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
NcanP55066 Gm12947-201ENSMUST00000116114 420 ntBASIC12.03□□□□□ -0.48
NcanP55066 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC12.03□□□□□ -0.48
NcanP55066 Gm15636-201ENSMUST00000119205 668 ntBASIC12.03□□□□□ -0.48
NcanP55066 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.03□□□□□ -0.48
NcanP55066 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.03□□□□□ -0.48
NcanP55066 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
NcanP55066 Gm19927-201ENSMUST00000185792 781 ntBASIC12.03□□□□□ -0.48
NcanP55066 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.03□□□□□ -0.48
NcanP55066 Gm37723-201ENSMUST00000194480 565 ntBASIC12.03□□□□□ -0.48
NcanP55066 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.03□□□□□ -0.48
NcanP55066 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC12.03□□□□□ -0.48
NcanP55066 AC154461.1-201ENSMUST00000224207 1005 ntBASIC12.03□□□□□ -0.48
NcanP55066 AC153153.1-201ENSMUST00000225803 793 ntBASIC12.03□□□□□ -0.48
NcanP55066 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Gm16477-201ENSMUST00000085365 801 ntBASIC12.03□□□□□ -0.48
NcanP55066 Gm17415-201ENSMUST00000096427 789 ntBASIC12.03□□□□□ -0.48
NcanP55066 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.03□□□□□ -0.48
NcanP55066 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.03□□□□□ -0.48
NcanP55066 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.03□□□□□ -0.48
NcanP55066 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.03□□□□□ -0.48
NcanP55066 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
NcanP55066 Gm7061-201ENSMUST00000118127 1416 ntBASIC12.03□□□□□ -0.48
NcanP55066 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.03□□□□□ -0.48
NcanP55066 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
NcanP55066 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms