Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox3P53784 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sox3P53784 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sox3P53784 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.02□□□□□ -0.65
Sox3P53784 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox3P53784 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox3P53784 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm25063-201ENSMUST00000104666 94 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm13263-201ENSMUST00000121271 838 ntBASIC11.01□□□□□ -0.65
Sox3P53784 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox3P53784 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Gm29410-201ENSMUST00000188383 694 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm37458-201ENSMUST00000194055 410 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Gm18460-201ENSMUST00000208088 464 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Sox3P53784 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.01□□□□□ -0.65
Sox3P53784 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sox3P53784 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.01□□□□□ -0.65
Sox3P53784 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11□□□□□ -0.65
Sox3P53784 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11□□□□□ -0.65
Sox3P53784 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Sox3P53784 Gm24934-201ENSMUST00000103764 111 ntBASIC11□□□□□ -0.65
Sox3P53784 Gm13328-201ENSMUST00000120816 1020 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms