Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.73□□□□□ -0.53
Sox1P53783 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Gm19228-201ENSMUST00000214030 717 ntBASIC11.73□□□□□ -0.53
Sox1P53783 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Gm18363-201ENSMUST00000221671 730 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Gm26035-201ENSMUST00000083065 308 ntBASIC11.73□□□□□ -0.53
Sox1P53783 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Sox1P53783 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.73□□□□□ -0.53
Sox1P53783 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Sox1P53783 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sox1P53783 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sox1P53783 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.72□□□□□ -0.53
Sox1P53783 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox1P53783 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox1P53783 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm5071-201ENSMUST00000104922 1035 ntBASIC11.72□□□□□ -0.53
Sox1P53783 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox1P53783 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox1P53783 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm26047-201ENSMUST00000157308 113 ntBASIC11.72□□□□□ -0.53
Sox1P53783 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.72□□□□□ -0.53
Sox1P53783 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm22119-201ENSMUST00000175594 99 ntBASIC11.72□□□□□ -0.53
Sox1P53783 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm26047-202ENSMUST00000198840 115 ntBASIC11.72□□□□□ -0.53
Sox1P53783 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.72□□□□□ -0.53
Sox1P53783 Gm18042-201ENSMUST00000219887 790 ntBASIC11.72□□□□□ -0.53
Sox1P53783 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.72□□□□□ -0.53
Sox1P53783 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox1P53783 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.72□□□□□ -0.53
Sox1P53783 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox1P53783 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sox1P53783 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sox1P53783 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sox1P53783 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sox1P53783 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sox1P53783 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sox1P53783 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sox1P53783 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.71□□□□□ -0.53
Sox1P53783 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.71□□□□□ -0.53
Sox1P53783 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox1P53783 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC11.71□□□□□ -0.53
Sox1P53783 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.71□□□□□ -0.53
Sox1P53783 Gm23432-201ENSMUST00000157181 131 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Gm25343-201ENSMUST00000157460 107 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Gm26119-201ENSMUST00000175601 104 ntBASIC11.71□□□□□ -0.53
Sox1P53783 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.71□□□□□ -0.53
Sox1P53783 Gm24312-201ENSMUST00000178677 119 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms