Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Btrc-209ENSMUST00000224478 2194 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pdx1P52946 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 Rgr-203ENSMUST00000225070 4704 ntBASIC11.3□□□□□ -0.6
Pdx1P52946 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pdx1P52946 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pdx1P52946 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.29□□□□□ -0.6
Pdx1P52946 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pdx1P52946 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Pdx1P52946 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Gm11949-201ENSMUST00000117640 372 ntBASIC11.29□□□□□ -0.6
Pdx1P52946 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.29□□□□□ -0.6
Pdx1P52946 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pdx1P52946 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.29□□□□□ -0.6
Pdx1P52946 Gm7741-201ENSMUST00000181445 989 ntBASIC11.29□□□□□ -0.6
Pdx1P52946 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.29□□□□□ -0.6
Pdx1P52946 Gm37981-201ENSMUST00000194280 535 ntBASIC11.29□□□□□ -0.6
Pdx1P52946 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.29□□□□□ -0.6
Pdx1P52946 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Gm17831-201ENSMUST00000205579 900 ntBASIC11.29□□□□□ -0.6
Pdx1P52946 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.29□□□□□ -0.6
Pdx1P52946 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.29□□□□□ -0.6
Pdx1P52946 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pdx1P52946 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pdx1P52946 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.28□□□□□ -0.6
Pdx1P52946 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.28□□□□□ -0.6
Pdx1P52946 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.28□□□□□ -0.6
Pdx1P52946 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pdx1P52946 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Gm9089-201ENSMUST00000122027 526 ntBASIC11.28□□□□□ -0.6
Pdx1P52946 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.28□□□□□ -0.6
Pdx1P52946 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.28□□□□□ -0.6
Pdx1P52946 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.28□□□□□ -0.6
Pdx1P52946 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.28□□□□□ -0.6
Pdx1P52946 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.28□□□□□ -0.6
Pdx1P52946 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pdx1P52946 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Pdx1P52946 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms