Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmga2P52927 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Hmga2P52927 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Hmga2P52927 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmga2P52927 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.71□□□□□ -0.86
Hmga2P52927 Mir1896-201ENSMUST00000122641 81 ntBASIC9.71□□□□□ -0.86
Hmga2P52927 Snora78-201ENSMUST00000158630 128 ntBASIC9.71□□□□□ -0.86
Hmga2P52927 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.71□□□□□ -0.86
Hmga2P52927 Gm20495-201ENSMUST00000173902 235 ntBASIC9.71□□□□□ -0.86
Hmga2P52927 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.71□□□□□ -0.86
Hmga2P52927 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Gm5745-201ENSMUST00000183748 313 ntBASIC9.71□□□□□ -0.86
Hmga2P52927 Gm43962-201ENSMUST00000203898 190 ntBASIC9.71□□□□□ -0.86
Hmga2P52927 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.71□□□□□ -0.86
Hmga2P52927 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Hmga2P52927 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Hmga2P52927 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Hmga2P52927 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmga2P52927 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.71□□□□□ -0.86
Hmga2P52927 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.71□□□□□ -0.86
Hmga2P52927 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.71□□□□□ -0.86
Hmga2P52927 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Hmga2P52927 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Hmga2P52927 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Hmga2P52927 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Hmga2P52927 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm7150-201ENSMUST00000122032 981 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm8343-201ENSMUST00000182705 994 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm38002-201ENSMUST00000193255 180 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 Gm37301-201ENSMUST00000195412 568 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm30285-201ENSMUST00000214614 422 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.7□□□□□ -0.86
Hmga2P52927 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Hmga2P52927 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC9.7□□□□□ -0.86
Hmga2P52927 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.7□□□□□ -0.86
Hmga2P52927 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.7□□□□□ -0.86
Hmga2P52927 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmga2P52927 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Hmga2P52927 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hmga2P52927 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Hmga2P52927 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hmga2P52927 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hmga2P52927 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms