Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Gm5705-201ENSMUST00000066241 711 ntBASIC10.68□□□□□ -0.7
Sox2P48432 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sox2P48432 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.68□□□□□ -0.7
Sox2P48432 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sox2P48432 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sox2P48432 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Sox2P48432 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.67□□□□□ -0.7
Sox2P48432 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.67□□□□□ -0.7
Sox2P48432 Olfr284-202ENSMUST00000206647 966 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Sox2P48432 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sox2P48432 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.67□□□□□ -0.7
Sox2P48432 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sox2P48432 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.66□□□□□ -0.7
Sox2P48432 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.66□□□□□ -0.7
Sox2P48432 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Sox2P48432 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Sox2P48432 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.66□□□□□ -0.7
Sox2P48432 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.66□□□□□ -0.7
Sox2P48432 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.66□□□□□ -0.7
Sox2P48432 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Sox2P48432 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sox2P48432 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sox2P48432 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms