Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm18056-201ENSMUST00000207670 568 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Gm18061-201ENSMUST00000208350 562 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Gm18063-201ENSMUST00000208529 568 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Gm18052-201ENSMUST00000208750 559 ntBASIC10.35□□□□□ -0.75
Rfx3P48381 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rfx3P48381 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rfx3P48381 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Rfx3P48381 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Rfx3P48381 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Rfx3P48381 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.34□□□□□ -0.75
Rfx3P48381 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Rfx3P48381 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Rfx3P48381 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.34□□□□□ -0.75
Rfx3P48381 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Mir7677-201ENSMUST00000184226 67 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Gm28071-201ENSMUST00000190355 478 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Gm45433-201ENSMUST00000209386 247 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Gm8913-201ENSMUST00000209491 641 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm10254-201ENSMUST00000052888 867 ntBASIC10.34□□□□□ -0.75
Rfx3P48381 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rfx3P48381 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.33□□□□□ -0.76
Rfx3P48381 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rfx3P48381 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.33□□□□□ -0.76
Rfx3P48381 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Rfx3P48381 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.33□□□□□ -0.76
Rfx3P48381 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rfx3P48381 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms