Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.8□□□□□ -0.52
Msh2P43247 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.8□□□□□ -0.52
Msh2P43247 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Msh2P43247 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Msh2P43247 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Msh2P43247 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Msh2P43247 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Msh2P43247 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.79□□□□□ -0.52
Msh2P43247 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.79□□□□□ -0.52
Msh2P43247 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Msh2P43247 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Msh2P43247 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Gm26286-201ENSMUST00000104166 134 ntBASIC11.79□□□□□ -0.52
Msh2P43247 Gm15711-201ENSMUST00000118889 535 ntBASIC11.79□□□□□ -0.52
Msh2P43247 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.79□□□□□ -0.52
Msh2P43247 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.79□□□□□ -0.52
Msh2P43247 Gm27341-201ENSMUST00000183570 106 ntBASIC11.79□□□□□ -0.52
Msh2P43247 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.79□□□□□ -0.52
Msh2P43247 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.79□□□□□ -0.52
Msh2P43247 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.79□□□□□ -0.52
Msh2P43247 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Msh2P43247 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Msh2P43247 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Msh2P43247 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.79□□□□□ -0.52
Msh2P43247 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Msh2P43247 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Msh2P43247 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Msh2P43247 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Gm14028-201ENSMUST00000117434 479 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.78□□□□□ -0.52
Msh2P43247 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.78□□□□□ -0.52
Msh2P43247 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Msh2P43247 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Msh2P43247 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Msh2P43247 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.78□□□□□ -0.52
Msh2P43247 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Msh2P43247 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms