Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm16570-201ENSMUST00000161951 436 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm23045-201ENSMUST00000175041 96 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm4654-201ENSMUST00000183305 982 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm43186-201ENSMUST00000198130 824 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.47□□□□□ -0.73
Nkx2-2P42586 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Nkx2-2P42586 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 Gm4726-201ENSMUST00000135604 736 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Gm6019-201ENSMUST00000148369 736 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 Gm21092-201ENSMUST00000178995 955 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 Gm17831-201ENSMUST00000205579 900 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.46□□□□□ -0.73
Nkx2-2P42586 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.46□□□□□ -0.73
Nkx2-2P42586 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nkx2-2P42586 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.46□□□□□ -0.74
Nkx2-2P42586 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-2P42586 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-2P42586 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms