Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.39□□□□□ -0.91
VhlP40338 Gm38002-201ENSMUST00000193255 180 ntBASIC9.39□□□□□ -0.91
VhlP40338 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.39□□□□□ -0.91
VhlP40338 Gm43962-201ENSMUST00000203898 190 ntBASIC9.39□□□□□ -0.91
VhlP40338 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.39□□□□□ -0.91
VhlP40338 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.39□□□□□ -0.91
VhlP40338 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
VhlP40338 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.39□□□□□ -0.91
VhlP40338 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
VhlP40338 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.39□□□□□ -0.91
VhlP40338 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.39□□□□□ -0.91
VhlP40338 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
VhlP40338 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
VhlP40338 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.39□□□□□ -0.91
VhlP40338 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VhlP40338 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
VhlP40338 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC9.38□□□□□ -0.91
VhlP40338 Gm14071-201ENSMUST00000117817 509 ntBASIC9.38□□□□□ -0.91
VhlP40338 Gm11573-201ENSMUST00000119956 394 ntBASIC9.38□□□□□ -0.91
VhlP40338 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.38□□□□□ -0.91
VhlP40338 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC9.38□□□□□ -0.91
VhlP40338 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
VhlP40338 Gm44008-201ENSMUST00000204345 412 ntBASIC9.38□□□□□ -0.91
VhlP40338 Gm45331-201ENSMUST00000209868 554 ntBASIC9.38□□□□□ -0.91
VhlP40338 Gm45598-202ENSMUST00000210719 986 ntBASIC9.38□□□□□ -0.91
VhlP40338 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.38□□□□□ -0.91
VhlP40338 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.38□□□□□ -0.91
VhlP40338 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Gm9823-201ENSMUST00000051212 327 ntBASIC9.38□□□□□ -0.91
VhlP40338 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VhlP40338 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
VhlP40338 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.38□□□□□ -0.91
VhlP40338 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
VhlP40338 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
VhlP40338 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms