Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.43□□□□□ -0.9
Timp3P39876 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.43□□□□□ -0.9
Timp3P39876 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.43□□□□□ -0.9
Timp3P39876 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.43□□□□□ -0.9
Timp3P39876 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.43□□□□□ -0.9
Timp3P39876 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.43□□□□□ -0.9
Timp3P39876 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Timp3P39876 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.43□□□□□ -0.9
Timp3P39876 Gm14585-201ENSMUST00000120713 634 ntBASIC9.43□□□□□ -0.9
Timp3P39876 Gm15595-201ENSMUST00000120840 961 ntBASIC9.43□□□□□ -0.9
Timp3P39876 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm23045-201ENSMUST00000175041 96 ntBASIC9.43□□□□□ -0.9
Timp3P39876 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.43□□□□□ -0.9
Timp3P39876 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.43□□□□□ -0.9
Timp3P39876 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.43□□□□□ -0.9
Timp3P39876 AC166992.1-201ENSMUST00000216356 565 ntBASIC9.43□□□□□ -0.9
Timp3P39876 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Timp3P39876 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Timp3P39876 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
Timp3P39876 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.42□□□□□ -0.9
Timp3P39876 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm22920-201ENSMUST00000102175 109 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm11667-201ENSMUST00000119828 486 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Gm12036-201ENSMUST00000120008 530 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gm4726-201ENSMUST00000135604 736 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm6019-201ENSMUST00000148369 736 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Timp3P39876 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm27530-201ENSMUST00000184096 98 ntBASIC9.42□□□□□ -0.9
Timp3P39876 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC9.42□□□□□ -0.9
Timp3P39876 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.42□□□□□ -0.9
Timp3P39876 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms