Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox5P35710 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sox5P35710 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.47□□□□□ -0.41
Sox5P35710 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.47□□□□□ -0.41
Sox5P35710 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm26047-201ENSMUST00000157308 113 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm29615-201ENSMUST00000185371 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Gm28224-201ENSMUST00000186078 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm29001-201ENSMUST00000186177 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm28292-201ENSMUST00000186593 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm28101-201ENSMUST00000187608 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm29076-201ENSMUST00000187689 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm28302-201ENSMUST00000187931 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm28646-201ENSMUST00000188220 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm28205-201ENSMUST00000189177 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm29032-201ENSMUST00000189797 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm28695-201ENSMUST00000190300 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm37448-201ENSMUST00000192795 697 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm38341-201ENSMUST00000195357 515 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm26047-202ENSMUST00000198840 115 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Gm8913-201ENSMUST00000209491 641 ntBASIC12.47□□□□□ -0.41
Sox5P35710 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.47□□□□□ -0.41
Sox5P35710 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.47□□□□□ -0.41
Sox5P35710 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Gm4978-201ENSMUST00000071565 801 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox5P35710 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.47□□□□□ -0.41
Sox5P35710 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.47□□□□□ -0.41
Sox5P35710 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Sox5P35710 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox5P35710 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox5P35710 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Sox5P35710 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sox5P35710 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox5P35710 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Sox5P35710 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Sox5P35710 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.46□□□□□ -0.41
Sox5P35710 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Sox5P35710 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Gm13665-201ENSMUST00000120830 528 ntBASIC12.46□□□□□ -0.41
Sox5P35710 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox5P35710 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.46□□□□□ -0.41
Sox5P35710 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox5P35710 Gm10807-201ENSMUST00000177134 795 ntBASIC12.46□□□□□ -0.41
Sox5P35710 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox5P35710 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.46□□□□□ -0.41
Sox5P35710 Gm38266-201ENSMUST00000194931 421 ntBASIC12.46□□□□□ -0.41
Sox5P35710 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.46□□□□□ -0.41
Sox5P35710 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.46□□□□□ -0.41
Sox5P35710 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox5P35710 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.46□□□□□ -0.41
Sox5P35710 Gm6867-201ENSMUST00000219165 425 ntBASIC12.46□□□□□ -0.41
Sox5P35710 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms