Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Nedd8P29595 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.48□□□□□ -0.73
Nedd8P29595 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.48□□□□□ -0.73
Nedd8P29595 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nedd8P29595 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nedd8P29595 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.47□□□□□ -0.73
Nedd8P29595 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Nedd8P29595 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.47□□□□□ -0.73
Nedd8P29595 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.47□□□□□ -0.73
Nedd8P29595 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.47□□□□□ -0.73
Nedd8P29595 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.47□□□□□ -0.73
Nedd8P29595 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Nedd8P29595 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.47□□□□□ -0.73
Nedd8P29595 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.47□□□□□ -0.73
Nedd8P29595 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Gm29705-201ENSMUST00000212598 474 ntBASIC10.47□□□□□ -0.73
Nedd8P29595 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.47□□□□□ -0.73
Nedd8P29595 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.47□□□□□ -0.73
Nedd8P29595 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Nedd8P29595 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Nedd8P29595 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Nedd8P29595 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Nedd8P29595 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Nedd8P29595 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.46□□□□□ -0.73
Nedd8P29595 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.46□□□□□ -0.73
Nedd8P29595 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Nedd8P29595 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.46□□□□□ -0.73
Nedd8P29595 Gm5370-201ENSMUST00000187187 574 ntBASIC10.46□□□□□ -0.73
Nedd8P29595 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Nedd8P29595 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.46□□□□□ -0.73
Nedd8P29595 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Nedd8P29595 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Nedd8P29595 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms