Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.1□□□□□ -0.31
Vcam1P29533 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Vcam1P29533 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vcam1P29533 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Gm15003-201ENSMUST00000118884 446 ntBASIC13.1□□□□□ -0.31
Vcam1P29533 Gm14165-201ENSMUST00000121456 952 ntBASIC13.1□□□□□ -0.31
Vcam1P29533 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.1□□□□□ -0.31
Vcam1P29533 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.1□□□□□ -0.31
Vcam1P29533 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.1□□□□□ -0.31
Vcam1P29533 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.1□□□□□ -0.31
Vcam1P29533 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.1□□□□□ -0.31
Vcam1P29533 Gm8325-201ENSMUST00000099086 453 ntBASIC13.1□□□□□ -0.31
Vcam1P29533 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vcam1P29533 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.1□□□□□ -0.31
Vcam1P29533 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vcam1P29533 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.09□□□□□ -0.31
Vcam1P29533 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vcam1P29533 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vcam1P29533 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.09□□□□□ -0.31
Vcam1P29533 Gm11619-201ENSMUST00000117474 237 ntBASIC13.09□□□□□ -0.31
Vcam1P29533 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Vcam1P29533 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vcam1P29533 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.09□□□□□ -0.31
Vcam1P29533 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.09□□□□□ -0.31
Vcam1P29533 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.09□□□□□ -0.31
Vcam1P29533 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Vcam1P29533 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.09□□□□□ -0.31
Vcam1P29533 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vcam1P29533 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.09□□□□□ -0.31
Vcam1P29533 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vcam1P29533 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.08□□□□□ -0.31
Vcam1P29533 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vcam1P29533 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vcam1P29533 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vcam1P29533 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vcam1P29533 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vcam1P29533 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.08□□□□□ -0.32
Vcam1P29533 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Vcam1P29533 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vcam1P29533 Snord55-201ENSMUST00000174939 79 ntBASIC13.08□□□□□ -0.32
Vcam1P29533 Gm44647-201ENSMUST00000207402 428 ntBASIC13.08□□□□□ -0.32
Vcam1P29533 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.08□□□□□ -0.32
Vcam1P29533 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC13.08□□□□□ -0.32
Vcam1P29533 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Vcam1P29533 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vcam1P29533 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.08□□□□□ -0.32
Vcam1P29533 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.08□□□□□ -0.32
Vcam1P29533 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms