Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
RxrbP28704 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.49□□□□□ -0.57
RxrbP28704 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.48□□□□□ -0.57
RxrbP28704 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.48□□□□□ -0.57
RxrbP28704 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RxrbP28704 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RxrbP28704 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RxrbP28704 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RxrbP28704 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RxrbP28704 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RxrbP28704 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.48□□□□□ -0.57
RxrbP28704 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.48□□□□□ -0.57
RxrbP28704 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.48□□□□□ -0.57
RxrbP28704 Gm6963-201ENSMUST00000147879 379 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.48□□□□□ -0.57
RxrbP28704 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.48□□□□□ -0.57
RxrbP28704 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Gm27501-201ENSMUST00000183599 107 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.48□□□□□ -0.57
RxrbP28704 Gm9368-201ENSMUST00000219348 831 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Gm9823-201ENSMUST00000051212 327 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.48□□□□□ -0.57
RxrbP28704 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
RxrbP28704 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RxrbP28704 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Rgr-203ENSMUST00000225070 4704 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.47□□□□□ -0.57
RxrbP28704 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
RxrbP28704 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Gm14071-201ENSMUST00000117817 509 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.47□□□□□ -0.57
RxrbP28704 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.47□□□□□ -0.57
RxrbP28704 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.47□□□□□ -0.57
RxrbP28704 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.47□□□□□ -0.57
RxrbP28704 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RxrbP28704 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms