Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6aP27664 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6aP27664 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6aP27664 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pde6aP27664 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pde6aP27664 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pde6aP27664 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.24□□□□□ -0.29
Pde6aP27664 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Pde6aP27664 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Pde6aP27664 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pde6aP27664 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Gm9645-201ENSMUST00000197131 792 ntBASIC13.24□□□□□ -0.29
Pde6aP27664 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.24□□□□□ -0.29
Pde6aP27664 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.24□□□□□ -0.29
Pde6aP27664 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.24□□□□□ -0.29
Pde6aP27664 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.24□□□□□ -0.29
Pde6aP27664 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pde6aP27664 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pde6aP27664 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Pde6aP27664 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pde6aP27664 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pde6aP27664 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.23□□□□□ -0.29
Pde6aP27664 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.23□□□□□ -0.29
Pde6aP27664 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pde6aP27664 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pde6aP27664 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pde6aP27664 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pde6aP27664 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Pde6aP27664 Gm14942-201ENSMUST00000119642 336 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.23□□□□□ -0.29
Pde6aP27664 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Gm6485-201ENSMUST00000160676 439 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Gm9550-201ENSMUST00000161130 862 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Gm23771-201ENSMUST00000178702 110 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Gm5523-201ENSMUST00000180415 997 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Gm43520-201ENSMUST00000197996 164 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
Pde6aP27664 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pde6aP27664 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pde6aP27664 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.23□□□□□ -0.29
Pde6aP27664 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6aP27664 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6aP27664 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pde6aP27664 Gm35850-202ENSMUST00000211705 2120 ntBASIC13.22□□□□□ -0.29
Pde6aP27664 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms