Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.87□□□□□ -0.51
H2afxP27661 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.87□□□□□ -0.51
H2afxP27661 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.87□□□□□ -0.51
H2afxP27661 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H2afxP27661 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.87□□□□□ -0.51
H2afxP27661 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.87□□□□□ -0.51
H2afxP27661 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.87□□□□□ -0.51
H2afxP27661 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afxP27661 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.87□□□□□ -0.51
H2afxP27661 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.87□□□□□ -0.51
H2afxP27661 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
H2afxP27661 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.87□□□□□ -0.51
H2afxP27661 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afxP27661 Gm37935-201ENSMUST00000192012 982 ntBASIC11.87□□□□□ -0.51
H2afxP27661 Gm5982-201ENSMUST00000196234 512 ntBASIC11.87□□□□□ -0.51
H2afxP27661 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Gm44855-201ENSMUST00000205725 362 ntBASIC11.87□□□□□ -0.51
H2afxP27661 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afxP27661 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.87□□□□□ -0.51
H2afxP27661 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.87□□□□□ -0.51
H2afxP27661 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.87□□□□□ -0.51
H2afxP27661 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
H2afxP27661 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afxP27661 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afxP27661 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.86□□□□□ -0.51
H2afxP27661 Gm7809-201ENSMUST00000153199 742 ntBASIC11.86□□□□□ -0.51
H2afxP27661 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Gm15823-201ENSMUST00000064305 670 ntBASIC11.86□□□□□ -0.51
H2afxP27661 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.86□□□□□ -0.51
H2afxP27661 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H2afxP27661 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
H2afxP27661 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H2afxP27661 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afxP27661 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afxP27661 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.85□□□□□ -0.51
H2afxP27661 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afxP27661 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
H2afxP27661 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.85□□□□□ -0.51
H2afxP27661 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afxP27661 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H2afxP27661 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afxP27661 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
H2afxP27661 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H2afxP27661 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H2afxP27661 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.85□□□□□ -0.51
H2afxP27661 Gm15004-201ENSMUST00000119192 630 ntBASIC11.85□□□□□ -0.51
H2afxP27661 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H2afxP27661 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.85□□□□□ -0.51
H2afxP27661 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.85□□□□□ -0.51
H2afxP27661 Gm3890-201ENSMUST00000182416 207 ntBASIC11.85□□□□□ -0.51
H2afxP27661 Gm43575-201ENSMUST00000196420 516 ntBASIC11.85□□□□□ -0.51
H2afxP27661 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.85□□□□□ -0.51
H2afxP27661 Gm20949-201ENSMUST00000206478 952 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms