Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.62□□□□□ -0.71
Cd40lgP27548 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cd40lgP27548 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Cd40lgP27548 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.62□□□□□ -0.71
Cd40lgP27548 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cd40lgP27548 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cd40lgP27548 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cd40lgP27548 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm15515-201ENSMUST00000117827 822 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm15432-201ENSMUST00000121106 195 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm42997-202ENSMUST00000200321 985 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm45575-201ENSMUST00000210283 548 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.61□□□□□ -0.71
Cd40lgP27548 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cd40lgP27548 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Cd40lgP27548 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cd40lgP27548 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.6□□□□□ -0.71
Cd40lgP27548 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.6□□□□□ -0.71
Cd40lgP27548 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm13263-201ENSMUST00000121271 838 ntBASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.6□□□□□ -0.71
Cd40lgP27548 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.6□□□□□ -0.71
Cd40lgP27548 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms