Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.57□□□□□ -0.4
Pde6bP23440 AC136376.2-201ENSMUST00000228819 490 ntBASIC12.57□□□□□ -0.4
Pde6bP23440 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.57□□□□□ -0.4
Pde6bP23440 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Pde6bP23440 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pde6bP23440 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Pde6bP23440 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pde6bP23440 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pde6bP23440 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Pde6bP23440 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pde6bP23440 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Gm25880-201ENSMUST00000104331 132 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pde6bP23440 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.56□□□□□ -0.4
Pde6bP23440 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Gm11244-201ENSMUST00000121243 237 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Gm14441-201ENSMUST00000121960 540 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Gm12628-201ENSMUST00000122193 382 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.56□□□□□ -0.4
Pde6bP23440 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Pde6bP23440 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Pde6bP23440 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.56□□□□□ -0.4
Pde6bP23440 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pde6bP23440 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pde6bP23440 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pde6bP23440 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pde6bP23440 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
Pde6bP23440 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.55□□□□□ -0.4
Pde6bP23440 Gm25766-201ENSMUST00000104101 131 ntBASIC12.55□□□□□ -0.4
Pde6bP23440 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.55□□□□□ -0.4
Pde6bP23440 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.55□□□□□ -0.4
Pde6bP23440 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Gm7741-201ENSMUST00000181445 989 ntBASIC12.55□□□□□ -0.4
Pde6bP23440 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.55□□□□□ -0.4
Pde6bP23440 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.55□□□□□ -0.4
Pde6bP23440 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.55□□□□□ -0.4
Pde6bP23440 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pde6bP23440 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms