Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
UbbP0CG49 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Mir8093-201ENSMUST00000185043 137 ntBASIC9.95□□□□□ -0.82
UbbP0CG49 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC9.95□□□□□ -0.82
UbbP0CG49 Gm31256-201ENSMUST00000194705 506 ntBASIC9.95□□□□□ -0.82
UbbP0CG49 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.95□□□□□ -0.82
UbbP0CG49 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.95□□□□□ -0.82
UbbP0CG49 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
UbbP0CG49 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Gm9396-201ENSMUST00000076703 567 ntBASIC9.95□□□□□ -0.82
UbbP0CG49 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
UbbP0CG49 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
UbbP0CG49 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Gm44369-201ENSMUST00000204543 2175 ntBASIC9.95□□□□□ -0.82
UbbP0CG49 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.95□□□□□ -0.82
UbbP0CG49 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.95□□□□□ -0.82
UbbP0CG49 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UbbP0CG49 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UbbP0CG49 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
UbbP0CG49 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.94□□□□□ -0.82
UbbP0CG49 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.94□□□□□ -0.82
UbbP0CG49 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
UbbP0CG49 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.94□□□□□ -0.82
UbbP0CG49 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
UbbP0CG49 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UbbP0CG49 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
UbbP0CG49 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
UbbP0CG49 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
UbbP0CG49 Gm15370-201ENSMUST00000117158 253 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm12463-201ENSMUST00000118271 849 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm14109-201ENSMUST00000118814 309 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm14726-201ENSMUST00000120623 896 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
UbbP0CG49 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.94□□□□□ -0.82
UbbP0CG49 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
UbbP0CG49 Gm27046-201ENSMUST00000182160 463 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm32999-201ENSMUST00000192693 562 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Olfr284-202ENSMUST00000206647 966 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.94□□□□□ -0.82
UbbP0CG49 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.94□□□□□ -0.82
UbbP0CG49 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
UbbP0CG49 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UbbP0CG49 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms