Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm6211-201ENSMUST00000147973 4275 ntBASIC16.99■□□□□ 0.31
NclP09405 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Gm9415-201ENSMUST00000200462 1321 ntBASIC16.98■□□□□ 0.31
NclP09405 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC16.98■□□□□ 0.31
NclP09405 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NclP09405 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NclP09405 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC16.98■□□□□ 0.31
NclP09405 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC16.98■□□□□ 0.31
NclP09405 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Gm23694-201ENSMUST00000179335 110 ntBASIC16.98■□□□□ 0.31
NclP09405 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC16.98■□□□□ 0.31
NclP09405 Gm43163-201ENSMUST00000196571 442 ntBASIC16.98■□□□□ 0.31
NclP09405 Gm42816-201ENSMUST00000198433 325 ntBASIC16.98■□□□□ 0.31
NclP09405 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC16.98■□□□□ 0.31
NclP09405 Gm3017-201ENSMUST00000203603 1126 ntBASIC16.98■□□□□ 0.31
NclP09405 Gm44008-201ENSMUST00000204345 412 ntBASIC16.98■□□□□ 0.31
NclP09405 Gm8436-201ENSMUST00000210152 1080 ntBASIC16.98■□□□□ 0.31
NclP09405 Gm5749-201ENSMUST00000210673 1090 ntBASIC16.98■□□□□ 0.31
NclP09405 Gm9139-201ENSMUST00000218817 700 ntBASIC16.98■□□□□ 0.31
NclP09405 AC122346.3-201ENSMUST00000223983 306 ntBASIC16.98■□□□□ 0.31
NclP09405 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NclP09405 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NclP09405 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC16.98■□□□□ 0.31
NclP09405 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC16.98■□□□□ 0.31
NclP09405 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NclP09405 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NclP09405 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NclP09405 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NclP09405 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
NclP09405 Gm15374-201ENSMUST00000119313 844 ntBASIC16.97■□□□□ 0.31
NclP09405 Gm13117-201ENSMUST00000120894 691 ntBASIC16.97■□□□□ 0.31
NclP09405 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC16.97■□□□□ 0.31
NclP09405 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC16.97■□□□□ 0.31
NclP09405 Gm6407-201ENSMUST00000176468 549 ntBASIC16.97■□□□□ 0.31
NclP09405 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC16.97■□□□□ 0.31
NclP09405 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC16.97■□□□□ 0.31
NclP09405 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NclP09405 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NclP09405 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC16.97■□□□□ 0.31
NclP09405 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Gm42913-201ENSMUST00000197936 1853 ntBASIC16.97■□□□□ 0.31
NclP09405 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NclP09405 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NclP09405 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
NclP09405 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC16.96■□□□□ 0.31
NclP09405 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NclP09405 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NclP09405 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC16.96■□□□□ 0.31
NclP09405 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC16.96■□□□□ 0.31
NclP09405 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC16.96■□□□□ 0.31
NclP09405 Gm20614-201ENSMUST00000177106 632 ntBASIC16.96■□□□□ 0.31
NclP09405 Mir7051-201ENSMUST00000184167 73 ntBASIC16.96■□□□□ 0.31
NclP09405 Gm6653-201ENSMUST00000218063 1288 ntBASIC16.96■□□□□ 0.31
NclP09405 CT009527.1-201ENSMUST00000224205 339 ntBASIC16.96■□□□□ 0.31
NclP09405 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NclP09405 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NclP09405 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NclP09405 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NclP09405 Gm17213-201ENSMUST00000165161 1360 ntBASIC16.96■□□□□ 0.31
NclP09405 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NclP09405 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms