Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
Hoxa3P02831 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.64□□□□□ -0.87
Hoxa3P02831 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Hoxa3P02831 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
Hoxa3P02831 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm16071-201ENSMUST00000119589 793 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm14665-201ENSMUST00000122294 557 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm8459-201ENSMUST00000162504 760 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm23771-201ENSMUST00000178702 110 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm12407-201ENSMUST00000180219 324 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm27438-201ENSMUST00000183480 110 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm17826-201ENSMUST00000189720 798 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm43520-201ENSMUST00000197996 164 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.63□□□□□ -0.87
Hoxa3P02831 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm44980-201ENSMUST00000205826 314 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm45550-201ENSMUST00000209380 946 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 AC153961.1-201ENSMUST00000217760 385 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm10752-201ENSMUST00000218348 729 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.63□□□□□ -0.87
Hoxa3P02831 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Hoxa3P02831 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hoxa3P02831 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Hoxa3P02831 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.62□□□□□ -0.87
Hoxa3P02831 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hoxa3P02831 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms