Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pdlim1O70400 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm12419-201ENSMUST00000116649 636 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm22846-201ENSMUST00000157706 270 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Mir6546-201ENSMUST00000184460 62 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm37986-201ENSMUST00000193285 383 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm43916-201ENSMUST00000205062 967 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pdlim1O70400 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pdlim1O70400 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.35□□□□□ -0.59
Pdlim1O70400 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.34□□□□□ -0.59
Pdlim1O70400 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm15573-201ENSMUST00000119487 540 ntBASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm14585-201ENSMUST00000120713 634 ntBASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm15329-201ENSMUST00000121408 155 ntBASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm42997-202ENSMUST00000200321 985 ntBASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.34□□□□□ -0.59
Pdlim1O70400 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm6722-201ENSMUST00000221586 390 ntBASIC11.34□□□□□ -0.59
Pdlim1O70400 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pdlim1O70400 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pdlim1O70400 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms