Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh11xF6ZNL5 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm15549-201ENSMUST00000121595 622 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm42867-201ENSMUST00000202995 469 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm43916-201ENSMUST00000205062 967 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm10179-201ENSMUST00000086233 688 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm37246-201ENSMUST00000192665 835 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 BC043934-202ENSMUST00000185694 2356 ntBASIC12.62□□□□□ -0.39
Pcdh11xF6ZNL5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pcdh11xF6ZNL5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms