Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm4294-201ENSMUST00000105169 614 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm13422-201ENSMUST00000118834 504 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm16219-201ENSMUST00000120096 274 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm14395-201ENSMUST00000120494 563 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm3671-201ENSMUST00000182463 1007 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Srp54bE9PXC0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm13117-201ENSMUST00000120894 691 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm12628-201ENSMUST00000122193 382 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm42816-201ENSMUST00000198433 325 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm5298-201ENSMUST00000201122 892 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm18561-201ENSMUST00000206027 804 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Srp54bE9PXC0 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.31□□□□□ -0.6
Srp54bE9PXC0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms