Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm13135-201ENSMUST00000117628 3121 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm16228-201ENSMUST00000162286 809 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm17944-201ENSMUST00000186351 643 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm28671-201ENSMUST00000187036 692 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 AC124613.1-201ENSMUST00000198711 88 ntBASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hfm1D3Z4R1 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Btrc-209ENSMUST00000224478 2194 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Gm23132-201ENSMUST00000104254 132 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Gm16288-201ENSMUST00000137940 367 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Gm25394-201ENSMUST00000157338 133 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Gm29543-201ENSMUST00000188138 967 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 AC241616.1-201ENSMUST00000213741 166 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 AC107711.4-201ENSMUST00000228948 440 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Gm5278-201ENSMUST00000055957 552 ntBASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hfm1D3Z4R1 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC15.83■□□□□ 0.13
Hfm1D3Z4R1 Gm43102-201ENSMUST00000201004 2324 ntBASIC15.83■□□□□ 0.13
Hfm1D3Z4R1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hfm1D3Z4R1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Gm6755-201ENSMUST00000100598 864 ntBASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Gm6740-201ENSMUST00000100617 864 ntBASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Gm13281-201ENSMUST00000120871 567 ntBASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Gm11736-201ENSMUST00000121468 505 ntBASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Platr10-202ENSMUST00000191479 818 ntBASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hfm1D3Z4R1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 AC122273.1-201ENSMUST00000213634 2327 ntBASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC15.82■□□□□ 0.12
Hfm1D3Z4R1 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms