Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb1A2AQ07 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb1A2AQ07 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tubb1A2AQ07 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb1A2AQ07 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb1A2AQ07 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Tubb1A2AQ07 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb1A2AQ07 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm7851-201ENSMUST00000117574 323 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm23085-201ENSMUST00000157849 293 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm27341-201ENSMUST00000183570 106 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm9540-201ENSMUST00000188230 478 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm7504-201ENSMUST00000201449 424 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm18212-201ENSMUST00000211678 889 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb1A2AQ07 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm13035-201ENSMUST00000117496 342 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm12266-201ENSMUST00000120311 962 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Olfml3-204ENSMUST00000169286 874 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm2383-201ENSMUST00000181461 807 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm6108-201ENSMUST00000208365 367 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb1A2AQ07 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms