Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Rarres2-204ENSMUST00000204267 795 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Zfp125-201ENSMUST00000079237 2488 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm11225-201ENSMUST00000118903 1049 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm13864-201ENSMUST00000119745 785 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm6236-201ENSMUST00000193785 1009 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm6008-201ENSMUST00000206542 874 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm32255-201ENSMUST00000219456 1349 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Gm18901-201ENSMUST00000197840 1444 ntBASIC5.85□□□□□ -1.47
Ubr4A2AN08 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Ubr4A2AN08 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm24180-201ENSMUST00000179961 110 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm8388-201ENSMUST00000193000 756 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 AC120406.1-201ENSMUST00000220362 482 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 AC140393.4-201ENSMUST00000226994 765 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 AC154220.1-201ENSMUST00000225033 1705 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Kcnk16-202ENSMUST00000225596 2127 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm10251-202ENSMUST00000181786 1688 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm22751-201ENSMUST00000102077 109 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Mir692-3-201ENSMUST00000102079 109 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Mir692-2-201ENSMUST00000102081 109 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm4996-201ENSMUST00000122042 784 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm17107-201ENSMUST00000170983 553 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm25687-201ENSMUST00000175442 241 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Pla2g5-202ENSMUST00000102511 690 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm25608-201ENSMUST00000104021 132 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Snora68-201ENSMUST00000104375 131 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gm37643-201ENSMUST00000195369 1260 ntBASIC5.84□□□□□ -1.47
Ubr4A2AN08 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Endov-201ENSMUST00000064513 954 ntTSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Ubr4A2AN08 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms