Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm16505-201ENSMUST00000179981 232 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 AU022133-201ENSMUST00000200601 873 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm45575-201ENSMUST00000210283 548 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm7940-201ENSMUST00000218195 769 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
ClcnkaQ9WUB7 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm12217-201ENSMUST00000118858 696 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm23085-201ENSMUST00000157849 293 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Mir6927-201ENSMUST00000184494 71 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm5982-201ENSMUST00000196234 512 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm5714-201ENSMUST00000197343 566 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm4482-201ENSMUST00000200876 742 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
ClcnkaQ9WUB7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
ClcnkaQ9WUB7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.58□□□□□ -0.71
ClcnkaQ9WUB7 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
ClcnkaQ9WUB7 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms