Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sec61a2Q9JLR1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm15515-201ENSMUST00000117827 822 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm4909-201ENSMUST00000118749 794 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Gm807-202ENSMUST00000224929 408 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Sec61a2Q9JLR1 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Sec61a2Q9JLR1 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 B9d1os-201ENSMUST00000137010 674 ntBASIC10.33□□□□□ -0.76
Sec61a2Q9JLR1 Gm16570-201ENSMUST00000161951 436 ntBASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms