Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm14071-201ENSMUST00000117817 509 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 AY036118-201ENSMUST00000200021 923 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm7940-201ENSMUST00000218195 769 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm26448-201ENSMUST00000082446 203 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ccl28Q9JIL2 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Gm43966-201ENSMUST00000203301 612 ntBASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Gm44262-201ENSMUST00000204969 372 ntBASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Gm8913-201ENSMUST00000209491 641 ntBASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Ccl28Q9JIL2 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms