Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp4bQ9D8B3 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.46□□□□□ -0.1
Chmp4bQ9D8B3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Chmp4bQ9D8B3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp4bQ9D8B3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp4bQ9D8B3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Chmp4bQ9D8B3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm13809-201ENSMUST00000117921 597 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm7857-201ENSMUST00000117957 358 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm27530-201ENSMUST00000184096 98 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm9540-201ENSMUST00000188230 478 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Btrc-209ENSMUST00000224478 2194 ntBASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Chmp4bQ9D8B3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm12247-201ENSMUST00000117585 670 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm15566-201ENSMUST00000121130 590 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm12407-201ENSMUST00000180219 324 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm5342-201ENSMUST00000181982 1003 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm27341-201ENSMUST00000183570 106 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm8342-201ENSMUST00000209839 757 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm19208-201ENSMUST00000213861 912 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Chmp4bQ9D8B3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4bQ9D8B3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4bQ9D8B3 Gm33366-201ENSMUST00000195583 3827 ntBASIC14.43□□□□□ -0.1
Chmp4bQ9D8B3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.43□□□□□ -0.1
Chmp4bQ9D8B3 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp4bQ9D8B3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms