Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sf3a3Q9D554 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Gm13140-201ENSMUST00000119840 3151 ntBASIC11.52□□□□□ -0.57
Sf3a3Q9D554 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Gm28882-201ENSMUST00000185504 314 ntBASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Gm42627-201ENSMUST00000197347 224 ntBASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sf3a3Q9D554 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm16177-201ENSMUST00000120728 718 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm27892-201ENSMUST00000185017 106 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm6745-201ENSMUST00000199216 526 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm9996-201ENSMUST00000070359 913 ntBASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Sf3a3Q9D554 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms