Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm14113-201ENSMUST00000121399 976 ntBASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm27440-201ENSMUST00000184785 107 ntBASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm18010-201ENSMUST00000203553 202 ntBASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm7904-201ENSMUST00000217049 465 ntBASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cldnd1Q9CQX5 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm11700-201ENSMUST00000119409 403 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm6564-201ENSMUST00000075377 619 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm10580-201ENSMUST00000097985 396 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm10582-201ENSMUST00000097987 396 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Gm10583-201ENSMUST00000097988 396 ntBASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cldnd1Q9CQX5 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cldnd1Q9CQX5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm15707-201ENSMUST00000118804 996 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm8019-201ENSMUST00000119317 587 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm24078-201ENSMUST00000158184 103 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm18123-201ENSMUST00000210874 822 ntBASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cldnd1Q9CQX5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms