Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim8Q99PJ2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Btrc-209ENSMUST00000224478 2194 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm14381-201ENSMUST00000122105 414 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm45224-201ENSMUST00000208203 414 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm18164-201ENSMUST00000213769 927 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm18166-201ENSMUST00000215557 927 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.24□□□□□ -0.61
Trim8Q99PJ2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim8Q99PJ2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.23□□□□□ -0.61
Trim8Q99PJ2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gm31256-201ENSMUST00000194705 506 ntBASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gm19187-201ENSMUST00000206781 892 ntBASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim8Q99PJ2 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Gm24255-201ENSMUST00000104481 128 ntBASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim8Q99PJ2 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms