Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm6114-201ENSMUST00000182472 968 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm28071-201ENSMUST00000190355 478 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm37666-201ENSMUST00000194110 866 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm43184-201ENSMUST00000197247 542 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm4157-201ENSMUST00000211647 679 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm5705-201ENSMUST00000066241 711 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf111Q99ML9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm11660-201ENSMUST00000120955 412 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm3786-201ENSMUST00000202659 378 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf111Q99ML9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf111Q99ML9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms