Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkx6-1Q99MA9 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm25492-201ENSMUST00000157383 129 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm8197-202ENSMUST00000193422 934 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 AC154634.3-201ENSMUST00000224589 736 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm8181-201ENSMUST00000062242 669 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm5513-201ENSMUST00000072982 1218 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Matn2-203ENSMUST00000226766 3252 ntBASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Nkx6-1Q99MA9 Map1b-203ENSMUST00000223725 2669 ntBASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Nkx6-1Q99MA9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms