Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Usp11Q99K46 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Usp11Q99K46 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Usp11Q99K46 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 AU022133-201ENSMUST00000200601 873 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm19208-201ENSMUST00000213861 912 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm807-202ENSMUST00000224929 408 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.08□□□□□ -0.48
Usp11Q99K46 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Usp11Q99K46 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.08□□□□□ -0.48
Usp11Q99K46 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Usp11Q99K46 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.07□□□□□ -0.48
Usp11Q99K46 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.07□□□□□ -0.48
Usp11Q99K46 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.07□□□□□ -0.48
Usp11Q99K46 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Rps4l-202ENSMUST00000204242 789 ntBASIC12.07□□□□□ -0.48
Usp11Q99K46 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Gm9797-202ENSMUST00000218003 294 ntBASIC12.07□□□□□ -0.48
Usp11Q99K46 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Usp11Q99K46 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Usp11Q99K46 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms