Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.55□□□□□ -0.56
Cdk9Q99J95 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Cdk9Q99J95 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm12241-201ENSMUST00000118330 726 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm14723-201ENSMUST00000118686 215 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm7722-201ENSMUST00000120646 741 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm38314-201ENSMUST00000195709 625 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm3961-201ENSMUST00000204425 994 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm7046-201ENSMUST00000221351 977 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Erich3-203ENSMUST00000189969 3460 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.54□□□□□ -0.56
Cdk9Q99J95 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm11960-201ENSMUST00000122068 925 ntBASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm24845-201ENSMUST00000158034 109 ntBASIC11.53□□□□□ -0.56
Cdk9Q99J95 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm37489-201ENSMUST00000191883 159 ntBASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.53□□□□□ -0.56
Cdk9Q99J95 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdk9Q99J95 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms